Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfho family protein | SB49_RS04845 | Not Available | Negative | 1092644 - 1095079 | 91151.4 |
| duf4834 family protein | SB49_RS04850 | Not Available | Negative | 1095101 - 1095364 | 10036.3 |
| transporter | SB49_RS04855 | Not Available | Positive | 1095469 - 1096449 | 37223.4 |
| hypothetical protein | SB49_RS04860 | Not Available | Positive | 1096557 - 1097678 | 43633.6 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | SB49_RS04865 | Not Available | Negative | 1097750 - 1099009 | 46223.9 |
| plp-dependent cysteine synthase family protein | SB49_RS04870 | Not Available | Negative | 1099138 - 1100178 | 38561.4 |
| s9 family peptidase | SB49_RS04875 | Not Available | Negative | 1100264 - 1102402 | 82637.0 |
| ybab/ebfc family nucleoid-associated protein | SB49_RS04880 | Not Available | Positive | 1102464 - 1102790 | 12046.7 |
| duf1508 domain-containing protein | SB49_RS04885 | Not Available | Positive | 1103128 - 1103451 | 12304.6 |
| low specificity l-threonine aldolase | SB49_RS04890 | Not Available | Negative | 1103446 - 1104468 | 37147.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
