Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS04795 | Not Available | Negative | 1080478 - 1080972 | 19269.9 |
| mbl fold metallo-hydrolase | SB49_RS04800 | Not Available | Negative | 1080988 - 1081752 | 29152.1 |
| hypothetical protein | SB49_RS04805 | Not Available | Positive | 1081841 - 1083298 | 56339.9 |
| thioredoxin-dependent thiol peroxidase | SB49_RS04810 | Not Available | Negative | 1083362 - 1083814 | 17000.2 |
| endonuclease iii | SB49_RS04815 | Not Available | Positive | 1083868 - 1084530 | 25173.7 |
| rna polymerase sigma factor | SB49_RS04820 | Not Available | Negative | 1084788 - 1085369 | 22666.5 |
| excinuclease abc subunit uvra | SB49_RS04825 | Not Available | Positive | 1085617 - 1088394 | 103493.0 |
| hypothetical protein | SB49_RS04830 | Not Available | Positive | 1088521 - 1089819 | 50399.9 |
| oligosaccharide flippase family protein | SB49_RS04835 | Not Available | Negative | 1089913 - 1091373 | 55217.9 |
| glycosyltransferase family 4 protein | SB49_RS04840 | Not Available | Negative | 1091373 - 1092644 | 48755.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
