Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane glutamic endopeptidase | SB49_RS04705 | Not Available | Positive | 1059452 - 1060009 | 21480.7 |
| tigr02757 family protein | SB49_RS04710 | Not Available | Positive | 1060006 - 1060770 | 29329.3 |
| s10 family peptidase | SB49_RS04715 | Not Available | Positive | 1060947 - 1062440 | 56473.2 |
| hypothetical protein | SB49_RS16240 | Not Available | Positive | 1062561 - 1062695 | 5038.22 |
| hypothetical protein | SB49_RS16245 | Not Available | Positive | 1062786 - 1062917 | 5128.29 |
| deor/glpr family dna-binding transcription regulator | SB49_RS04720 | Not Available | Negative | 1062921 - 1063682 | 28187.2 |
| glycerol-3-phosphate dehydrogenase/oxidase | SB49_RS04725 | Not Available | Positive | 1063842 - 1065428 | 58964.3 |
| glycerol kinase glpk | SB49_RS04730 | Not Available | Positive | 1065474 - 1066964 | 54677.5 |
| mip/aquaporin family protein | SB49_RS04735 | Not Available | Positive | 1066990 - 1067730 | 25816.0 |
| dienelactone hydrolase | SB49_RS04740 | Not Available | Positive | 1067727 - 1069052 | 48727.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
