Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6146 family protein | SB49_RS04655 | Not Available | Positive | 1052473 - 1052940 | 18634.4 |
| duf6787 family protein | SB49_RS04660 | Not Available | Positive | 1052975 - 1053292 | 12351.6 |
| sterol desaturase family protein | SB49_RS04665 | Not Available | Negative | 1053596 - 1054471 | 34498.3 |
| monoheme cytochrome c | SB49_RS04670 | Not Available | Negative | 1054541 - 1055011 | 17933.3 |
| sulfite oxidase | SB49_RS04675 | Not Available | Negative | 1055016 - 1056236 | 45363.8 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | SB49_RS04680 | Not Available | Negative | 1056334 - 1056933 | 22976.9 |
| hypothetical protein | SB49_RS04685 | Not Available | Negative | 1057030 - 1057329 | 11164.9 |
| gtp cyclohydrolase i fole | SB49_RS04690 | Not Available | Negative | 1057388 - 1057978 | 22667.5 |
| peptide-methionine (s)-s-oxide reductase msra | SB49_RS04695 | Not Available | Negative | 1057994 - 1058536 | 20634.3 |
| abc transporter atp-binding protein | SB49_RS04700 | Not Available | Positive | 1058787 - 1059449 | 24600.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
