Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase/topoisomerase iv subunit a | SB49_RS04605 | Not Available | Negative | 1036201 - 1038849 | 99868.8 |
| dna topoisomerase iv subunit b | SB49_RS04610 | Not Available | Negative | 1038881 - 1040734 | 70478.2 |
| carboxypeptidase-like regulatory domain-containing protein | SB49_RS04615 | Not Available | Positive | 1041212 - 1042960 | 66979.4 |
| redox-regulated atpase ychf | SB49_RS04620 | Not Available | Negative | 1043419 - 1044513 | 40135.1 |
| tonb-dependent receptor | SB49_RS04625 | Not Available | Positive | 1044879 - 1047695 | 101444.0 |
| 4fe-4s dicluster domain-containing protein | SB49_RS04630 | Not Available | Negative | 1048082 - 1048435 | 12851.8 |
| acyl-coa reductase | SB49_RS04635 | Not Available | Positive | 1048502 - 1049563 | 40279.0 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | SB49_RS04640 | Not Available | Positive | 1049634 - 1050698 | 39189.4 |
| d-2-hydroxyacid dehydrogenase | SB49_RS04645 | Not Available | Positive | 1050730 - 1051680 | 34608.1 |
| duf937 domain-containing protein | SB49_RS04650 | Not Available | Positive | 1051758 - 1052390 | 21090.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
