Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | SB49_RS04555 | Not Available | Positive | 1028646 - 1029707 | 39884.2 |
| hypothetical protein | SB49_RS04560 | Not Available | Positive | 1029807 - 1030133 | 12757.1 |
| yihy/virulence factor brkb family protein | SB49_RS04565 | Not Available | Negative | 1030137 - 1031018 | 32668.6 |
| dinb family protein | SB49_RS04570 | Not Available | Negative | 1031018 - 1031533 | 19638.4 |
| lrp/asnc family transcriptional regulator | SB49_RS04575 | Not Available | Negative | 1031599 - 1032078 | 18171.4 |
| m14 metallopeptidase family protein | SB49_RS04580 | Not Available | Negative | 1032193 - 1033302 | 42279.7 |
| helix-turn-helix transcriptional regulator | SB49_RS04585 | Not Available | Positive | 1033599 - 1034009 | 15347.4 |
| hypothetical protein | SB49_RS04590 | Not Available | Positive | 1034091 - 1034468 | 14494.1 |
| sterol desaturase family protein | SB49_RS04595 | Not Available | Negative | 1034712 - 1035671 | 37014.5 |
| large-conductance mechanosensitive channel protein mscl | SB49_RS04600 | Not Available | Negative | 1035758 - 1036192 | 16481.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
