Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pglz domain-containing protein | SB49_RS04510 | Not Available | Positive | 1019645 - 1021189 | 59831.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | SB49_RS04515 | Not Available | Positive | 1021210 - 1021617 | 15247.2 |
| hypothetical protein | SB49_RS04520 | Not Available | Positive | 1021956 - 1022339 | 14585.7 |
| hypothetical protein | SB49_RS04525 | Not Available | Negative | 1022461 - 1023723 | 49539.8 |
| hypothetical protein | SB49_RS04530 | Not Available | Negative | 1023941 - 1024537 | 23228.7 |
| peptidase m28 | SB49_RS15950 | Not Available | Positive | 1024939 - 1025091 | 5238.21 |
| hypothetical protein | SB49_RS04535 | Not Available | Positive | 1025191 - 1025733 | 21733.2 |
| alanine dehydrogenase | SB49_RS04540 | Not Available | Positive | 1025775 - 1026974 | 43725.7 |
| hypothetical protein | SB49_RS04545 | Not Available | Positive | 1026978 - 1027361 | 14532.8 |
| proline dehydrogenase family protein | SB49_RS04550 | Not Available | Negative | 1027385 - 1028551 | 44829.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
