Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prohibitin family protein | SB49_RS04460 | Not Available | Negative | 1008767 - 1009582 | 30153.6 |
| hypothetical protein | SB49_RS04465 | Not Available | Negative | 1009598 - 1011631 | 76379.6 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SB49_RS04470 | Not Available | Negative | 1011721 - 1012467 | 26457.9 |
| succinate--coa ligase subunit alpha | SB49_RS04475 | Not Available | Negative | 1012621 - 1013493 | 30017.4 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | SB49_RS04480 | Not Available | Negative | 1013568 - 1014500 | 33502.4 |
| elongation factor p | SB49_RS04485 | Not Available | Negative | 1014577 - 1015143 | 20920.9 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | SB49_RS04490 | Not Available | Negative | 1015149 - 1015934 | 28772.6 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | SB49_RS04495 | Not Available | Negative | 1015936 - 1017336 | 51847.3 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | SB49_RS04500 | Not Available | Negative | 1017329 - 1018354 | 36626.6 |
| hd domain-containing protein | SB49_RS04505 | Not Available | Negative | 1018378 - 1019607 | 47425.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
