Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1853 family protein | SB49_RS04410 | Not Available | Positive | 999911 - 1000750 | 33215.7 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | SB49_RS04415 | Not Available | Negative | 1000724 - 1001353 | 23294.8 |
| imidazole glycerol phosphate synthase subunit hisf | SB49_RS04420 | Not Available | Negative | 1001427 - 1002182 | 27308.9 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | SB49_RS04425 | Not Available | Negative | 1002243 - 1002974 | 26887.4 |
| gnat family n-acetyltransferase | SB49_RS04430 | Not Available | Negative | 1002983 - 1003402 | 16182.5 |
| imidazole glycerol phosphate synthase subunit hish | SB49_RS04435 | Not Available | Negative | 1003406 - 1003990 | 21535.2 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | SB49_RS04440 | Not Available | Negative | 1004076 - 1005209 | 43122.6 |
| histidinol-phosphate transaminase | SB49_RS04445 | Not Available | Negative | 1005261 - 1006316 | 39308.9 |
| histidinol dehydrogenase | SB49_RS04450 | Not Available | Negative | 1006377 - 1007666 | 46837.1 |
| atp phosphoribosyltransferase | SB49_RS04455 | Not Available | Negative | 1007666 - 1008523 | 31543.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
