Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine o-acetyltransferase epsc | SB49_RS04365 | Not Available | Positive | 991207 - 992001 | 29777.0 |
| cysteine synthase cysm | SB49_RS04370 | Not Available | Positive | 991991 - 992875 | 32065.4 |
| duf1328 family protein | SB49_RS15865 | Not Available | Negative | 992904 - 993035 | 4542.1 |
| hypothetical protein | SB49_RS04375 | Not Available | Negative | 993105 - 993617 | 19527.2 |
| dps family protein | SB49_RS04380 | Not Available | Negative | 993716 - 994216 | 19413.2 |
| magnesium/cobalt transporter cora | SB49_RS04385 | Not Available | Negative | 994428 - 995519 | 42458.0 |
| trna pseudouridine(38-40) synthase trua | SB49_RS04390 | Not Available | Negative | 995566 - 996351 | 30080.5 |
| hypothetical protein | SB49_RS04395 | Not Available | Positive | 996646 - 997128 | 19249.9 |
| hypothetical protein | SB49_RS04400 | Not Available | Negative | 997180 - 998649 | 55688.9 |
| vwa domain-containing protein | SB49_RS04405 | Not Available | Negative | 998690 - 999832 | 43427.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
