Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | SB49_RS04315 | Not Available | Negative | 977351 - 978778 | 54953.4 |
| hypothetical protein | SB49_RS04320 | Not Available | Negative | 978771 - 981362 | 99160.6 |
| response regulator transcription factor | SB49_RS04325 | Not Available | Negative | 981370 - 981741 | 13672.8 |
| atp-binding protein | SB49_RS04330 | Not Available | Negative | 981763 - 983562 | 68109.2 |
| dipeptidase | SB49_RS04335 | Not Available | Positive | 983743 - 985032 | 47953.8 |
| acyl-coa thioesterase | SB49_RS04340 | Not Available | Negative | 985029 - 985424 | 14833.1 |
| hypothetical protein | SB49_RS04345 | Not Available | Positive | 986037 - 986801 | 28111.6 |
| vps10 domain-containing protein | SB49_RS04350 | Not Available | Positive | 986863 - 989895 | 112450.0 |
| hypothetical protein | SB49_RS04355 | Not Available | Positive | 990032 - 990442 | 16012.6 |
| duf2461 domain-containing protein | SB49_RS04360 | Not Available | Negative | 990431 - 991111 | 26586.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
