Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2007 domain-containing protein | SB49_RS04265 | Not Available | Negative | 965831 - 966061 | 8224.76 |
| dead/deah box helicase | SB49_RS04270 | Not Available | Negative | 966072 - 966686 | 23094.1 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | SB49_RS04275 | Not Available | Negative | 966944 - 967786 | 31211.4 |
| glycosyltransferase | SB49_RS04280 | Not Available | Negative | 967856 - 969106 | 47086.1 |
| dead/deah box helicase | SB49_RS04285 | Not Available | Negative | 969110 - 970621 | 58577.4 |
| glyoxylate/hydroxypyruvate reductase a | SB49_RS04290 | Not Available | Negative | 970729 - 971652 | 34656.1 |
| duf6155 family protein | SB49_RS04295 | Not Available | Negative | 971656 - 972165 | 20028.3 |
| rna polymerase sigma factor rpod/siga | SB49_RS04300 | Not Available | Positive | 972358 - 973221 | 32805.6 |
| yaio family outer membrane beta-barrel protein | SB49_RS04305 | Not Available | Negative | 973681 - 974949 | 47893.3 |
| lta synthase family protein | SB49_RS04310 | Not Available | Negative | 974946 - 977345 | 92286.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
