Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| moad/this family protein | SB49_RS04215 | Not Available | Negative | 956958 - 957209 | 8975.78 |
| vwa domain-containing protein | SB49_RS04220 | Not Available | Positive | 957486 - 958577 | 39179.8 |
| m14 family zinc carboxypeptidase | SB49_RS04225 | Not Available | Negative | 958924 - 960390 | 55276.0 |
| peptidoglycan recognition family protein | SB49_RS04230 | Not Available | Negative | 960398 - 961060 | 25662.1 |
| 3d domain-containing protein | SB49_RS04235 | Not Available | Negative | 961107 - 961565 | 17406.6 |
| pirin family protein | SB49_RS04240 | Not Available | Negative | 961575 - 962447 | 32566.4 |
| serine hydrolase | SB49_RS04245 | Not Available | Positive | 962531 - 963868 | 50129.8 |
| bluf domain-containing protein | SB49_RS04250 | Not Available | Negative | 963944 - 964378 | 16944.0 |
| bluf domain-containing protein | SB49_RS04255 | Not Available | Negative | 964503 - 964934 | 16620.0 |
| srpbcc domain-containing protein | SB49_RS04260 | Not Available | Negative | 965118 - 965504 | 14634.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
