Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low molecular weight phosphatase family protein | SB49_RS04115 | Not Available | Negative | 935764 - 936390 | 23256.5 |
| helix-turn-helix transcriptional regulator | SB49_RS04120 | Not Available | Negative | 936426 - 936758 | 12100.7 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | SB49_RS04125 | Not Available | Positive | 936900 - 937799 | 33810.9 |
| dead/deah box helicase | SB49_RS04130 | Not Available | Negative | 937819 - 939375 | 59791.5 |
| haloacid dehalogenase type ii | SB49_RS04135 | Not Available | Negative | 939576 - 940244 | 24581.1 |
| cold-shock protein | SB49_RS04140 | Not Available | Negative | 940461 - 940913 | 17107.4 |
| mfs transporter | SB49_RS04145 | Not Available | Negative | 941219 - 942487 | 46225.0 |
| flagellar motor protein motb | SB49_RS04150 | Not Available | Positive | 942669 - 943502 | 30853.9 |
| alpha,alpha-trehalase tref | SB49_RS04155 | Not Available | Negative | 943586 - 945166 | 60631.6 |
| mgh1-like glycoside hydrolase domain-containing protein | SB49_RS04160 | Not Available | Negative | 945308 - 947959 | 103122.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
