Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | SB49_RS04015 | Not Available | Negative | 915953 - 916534 | 22432.9 |
| fad-binding oxidoreductase | SB49_RS04020 | Not Available | Negative | 916663 - 918048 | 51006.9 |
| cupin domain-containing protein | SB49_RS04025 | Not Available | Negative | 918126 - 918608 | 17620.3 |
| nickel-binding protein | SB49_RS04030 | Not Available | Negative | 918861 - 919958 | 41197.3 |
| lrp/asnc family transcriptional regulator | SB49_RS04035 | Not Available | Negative | 920047 - 920457 | 15712.4 |
| sulfite exporter taue/safe family protein | SB49_RS04040 | Not Available | Positive | 920573 - 921277 | 25832.5 |
| dmt family transporter | SB49_RS04045 | Not Available | Negative | 921299 - 922168 | 32225.5 |
| nad(p)/fad-dependent oxidoreductase | SB49_RS04050 | Not Available | Negative | 922278 - 923528 | 46313.6 |
| doxx family protein | SB49_RS04055 | Not Available | Positive | 923682 - 924038 | 13406.1 |
| doxx family protein | SB49_RS04060 | Not Available | Negative | 924053 - 924418 | 13375.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
