Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | SB49_RS03965 | Not Available | Negative | 905338 - 906330 | 35045.1 |
| dienelactone hydrolase family protein | SB49_RS03970 | Not Available | Negative | 906528 - 907382 | 31291.2 |
| dead/deah box helicase | SB49_RS03975 | Not Available | Negative | 907495 - 908805 | 49224.2 |
| dead/deah box helicase | SB49_RS03980 | Not Available | Negative | 908864 - 910204 | 49737.5 |
| hypothetical protein | SB49_RS16175 | Not Available | Negative | 910382 - 911944 | 54458.0 |
| peptidylprolyl isomerase | SB49_RS03990 | Not Available | Negative | 912341 - 912772 | 15599.6 |
| bluf domain-containing protein | SB49_RS03995 | Not Available | Negative | 913011 - 913451 | 17059.6 |
| osmc family protein | SB49_RS04000 | Not Available | Negative | 913629 - 914048 | 14808.5 |
| alkene reductase | SB49_RS04005 | Not Available | Negative | 914083 - 915195 | 41246.9 |
| type 1 glutamine amidotransferase domain-containing protein | SB49_RS04010 | Not Available | Negative | 915199 - 915879 | 24731.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
