Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-ta family plp-dependent enzyme | SB49_RS03915 | Not Available | Negative | 888977 - 890104 | 42343.2 |
| sodium/glutamate symporter | SB49_RS03920 | Not Available | Negative | 890120 - 891454 | 48602.2 |
| coce/nond family hydrolase | SB49_RS03925 | Not Available | Negative | 891545 - 893425 | 71572.1 |
| acyl-coa dehydrogenase family protein | SB49_RS03930 | Not Available | Negative | 893566 - 894798 | 45924.5 |
| sdr family nad(p)-dependent oxidoreductase | SB49_RS03935 | Not Available | Negative | 894925 - 896475 | 58414.2 |
| hypothetical protein | SB49_RS03940 | Not Available | Positive | 897576 - 899042 | 55474.1 |
| type ia dna topoisomerase | SB49_RS03945 | Not Available | Positive | 899186 - 901489 | 86972.2 |
| duf2207 domain-containing protein | SB49_RS03950 | Not Available | Negative | 901552 - 903246 | 63807.4 |
| lema family protein | SB49_RS03955 | Not Available | Negative | 903246 - 903806 | 21151.3 |
| serine hydrolase | SB49_RS03960 | Not Available | Negative | 903975 - 905102 | 41287.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
