Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase, carboxyltransferase subunit beta | SB49_RS00355 | Not Available | Negative | 69135 - 70001 | 31901.5 |
| class ii fructose-bisphosphate aldolase | SB49_RS00360 | Not Available | Negative | 70036 - 71103 | 39003.1 |
| bama/tama family outer membrane protein | SB49_RS00365 | Not Available | Negative | 71163 - 73745 | 98586.6 |
| rna methyltransferase | SB49_RS00370 | Not Available | Positive | 73770 - 74489 | 26791.5 |
| porin family protein | SB49_RS00375 | Not Available | Negative | 74498 - 75193 | 26588.6 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | SB49_RS00380 | Not Available | Negative | 75198 - 75926 | 26725.5 |
| trk system potassium transporter trka | SB49_RS00385 | Not Available | Positive | 76196 - 77545 | 49489.1 |
| trkh family potassium uptake protein | SB49_RS00390 | Not Available | Positive | 77547 - 79037 | 54698.1 |
| pyridoxal phosphate-dependent aminotransferase | SB49_RS00395 | Not Available | Negative | 79092 - 80276 | 42990.4 |
| acyl-coa desaturase | SB49_RS00400 | Not Available | Negative | 80290 - 81393 | 43037.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
