Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | SB49_RS03865 | Not Available | Positive | 879377 - 882025 | 100625.0 |
| response regulator | SB49_RS03870 | Not Available | Positive | 882034 - 882417 | 14815.2 |
| sugar phosphate isomerase/epimerase | SB49_RS03875 | Not Available | Negative | 882568 - 883479 | 35086.7 |
| duf4251 domain-containing protein | SB49_RS03880 | Not Available | Negative | 883658 - 884209 | 20246.2 |
| btpa/sgcq family protein | SB49_RS03885 | Not Available | Negative | 884300 - 885100 | 28987.4 |
| carbohydrate kinase family protein | SB49_RS03890 | Not Available | Positive | 885166 - 886086 | 33598.8 |
| pseudouridine-5'-phosphate glycosidase | SB49_RS03895 | Not Available | Positive | 886083 - 887003 | 32525.7 |
| pseudouridine synthase | SB49_RS03900 | Not Available | Positive | 887086 - 887670 | 21809.9 |
| grea/greb family elongation factor | SB49_RS03905 | Not Available | Negative | 887693 - 888196 | 18600.5 |
| duf1080 domain-containing protein | SB49_RS03910 | Not Available | Negative | 888260 - 888955 | 25998.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
