Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leishmanolysin-related zinc metalloendopeptidase | SB49_RS03815 | Not Available | Negative | 867042 - 868088 | 38336.4 |
| class i sam-dependent methyltransferase | SB49_RS03820 | Not Available | Negative | 868330 - 869145 | 31347.4 |
| cold-shock protein | SB49_RS03825 | Not Available | Negative | 869572 - 869763 | 7029.26 |
| thiol-activated cytolysin family protein | SB49_RS03830 | Not Available | Negative | 870251 - 872257 | 72608.1 |
| response regulator transcription factor | SB49_RS03835 | Not Available | Negative | 872525 - 873169 | 24168.9 |
| sensor histidine kinase | SB49_RS03840 | Not Available | Negative | 873170 - 875029 | 70924.3 |
| hypothetical protein | SB49_RS03845 | Not Available | Negative | 875586 - 876386 | 29632.3 |
| aba4-like family protein | SB49_RS03850 | Not Available | Negative | 876383 - 876805 | 16042.5 |
| hypothetical protein | SB49_RS03855 | Not Available | Positive | 877411 - 877659 | 9132.41 |
| transglutaminase-like domain-containing protein | SB49_RS03860 | Not Available | Negative | 877662 - 879029 | 51294.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
