Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-acp reductase | SB49_RS03765 | Not Available | Positive | 856952 - 857749 | 29240.3 |
| 3-hydroxyacyl-acp dehydratase fabz family protein | SB49_RS03770 | Not Available | Positive | 857798 - 858238 | 16449.3 |
| beta-ketoacyl synthase | SB49_RS03775 | Not Available | Positive | 858235 - 859512 | 45266.0 |
| phosphopantetheine-binding protein | SB49_RS03780 | Not Available | Positive | 859535 - 859783 | 9337.11 |
| terc family protein | SB49_RS03785 | Not Available | Negative | 859827 - 860771 | 35472.7 |
| hpf/raia family ribosome-associated protein | SB49_RS03790 | Not Available | Negative | 861021 - 861323 | 11318.5 |
| duf6642 family protein | SB49_RS03795 | Not Available | Negative | 862215 - 862814 | 23142.2 |
| crp/fnr family transcriptional regulator | SB49_RS03800 | Not Available | Positive | 863147 - 863716 | 22184.9 |
| acyl-coa desaturase | SB49_RS03805 | Not Available | Positive | 863785 - 864522 | 29133.6 |
| hypothetical protein | SB49_RS03810 | Not Available | Negative | 864784 - 866727 | 71642.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
