Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside phosphorylase | SB49_RS03715 | Not Available | Negative | 847252 - 848121 | 32491.8 |
| duf1835 domain-containing protein | SB49_RS03720 | Not Available | Negative | 848123 - 849055 | 35849.9 |
| translation initiation factor | SB49_RS03725 | Not Available | Negative | 849145 - 849477 | 12588.1 |
| isopenicillin n synthase family oxygenase | SB49_RS03730 | Not Available | Negative | 849537 - 850487 | 35948.9 |
| thiamine pyrophosphate-dependent enzyme | SB49_RS03735 | Not Available | Positive | 850615 - 852591 | 74090.2 |
| lipocalin family protein | SB49_RS03740 | Not Available | Positive | 852732 - 853214 | 17864.4 |
| ompa family protein | SB49_RS03745 | Not Available | Positive | 853226 - 853918 | 24081.5 |
| nad(p)/fad-dependent oxidoreductase | SB49_RS03750 | Not Available | Positive | 853994 - 855121 | 42222.7 |
| methyltransferase domain-containing protein | SB49_RS03755 | Not Available | Positive | 855118 - 855843 | 27877.1 |
| type iii polyketide synthase | SB49_RS03760 | Not Available | Positive | 855840 - 856895 | 38663.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
