Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate synthase | SB49_RS03665 | Not Available | Positive | 835228 - 836292 | 38528.0 |
| dicarboxylate/amino acid:cation symporter | SB49_RS03670 | Not Available | Positive | 836355 - 837668 | 46882.4 |
| dicarboxylate/amino acid:cation symporter | SB49_RS03675 | Not Available | Positive | 837810 - 839111 | 47082.4 |
| flavohemoglobin expression-modulating qegla motif protein | SB49_RS03680 | Not Available | Positive | 839174 - 840343 | 45430.5 |
| duf4139 domain-containing protein | SB49_RS03685 | Not Available | Negative | 840425 - 842458 | 75159.4 |
| thiol-disulfide oxidoreductase dcc family protein | SB49_RS03690 | Not Available | Negative | 842567 - 842974 | 15545.0 |
| endonuclease muts2 | SB49_RS03695 | Not Available | Negative | 842978 - 845149 | 82685.8 |
| uracil-dna glycosylase | SB49_RS03700 | Not Available | Positive | 845199 - 845864 | 25471.2 |
| two-component system response regulator | SB49_RS03705 | Not Available | Positive | 845943 - 846380 | 16634.1 |
| substrate-binding domain-containing protein | SB49_RS03710 | Not Available | Negative | 846403 - 847251 | 31890.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
