Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | SB49_RS03615 | Not Available | Negative | 822377 - 823021 | 24520.6 |
| gamma-glutamyltransferase | SB49_RS03620 | Not Available | Negative | 823044 - 824729 | 61053.1 |
| acp phosphodiesterase | SB49_RS03625 | Not Available | Negative | 824717 - 825310 | 23342.8 |
| phosphoglucosamine mutase | SB49_RS03630 | Not Available | Positive | 825407 - 826795 | 50173.3 |
| lysophospholipid acyltransferase family protein | SB49_RS03635 | Not Available | Negative | 826858 - 827754 | 35608.6 |
| rhomboid family intramembrane serine protease | SB49_RS03640 | Not Available | Positive | 827809 - 828456 | 23740.1 |
| hypothetical protein | SB49_RS03645 | Not Available | Positive | 828640 - 830280 | 58374.2 |
| tlpa disulfide reductase family protein | SB49_RS03650 | Not Available | Negative | 830374 - 831483 | 40890.5 |
| hypothetical protein | SB49_RS03655 | Not Available | Negative | 831586 - 832080 | 18452.6 |
| fad-binding and (fe-s)-binding domain-containing protein | SB49_RS03660 | Not Available | Positive | 832177 - 835089 | 107307.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
