Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | SB49_RS03570 | Not Available | Negative | 809121 - 809498 | 13612.2 |
| thiamine pyrophosphate-dependent enzyme | SB49_RS03575 | Not Available | Negative | 809765 - 812176 | 90055.4 |
| hypothetical protein | SB49_RS03580 | Not Available | Negative | 812339 - 815179 | 110235.0 |
| tigr00730 family rossman fold protein | SB49_RS03585 | Not Available | Negative | 815186 - 815872 | 25461.5 |
| excinuclease abc subunit uvra | SB49_RS03590 | Not Available | Negative | 815943 - 818777 | 105549.0 |
| hypothetical protein | SB49_RS03595 | Not Available | Positive | 818900 - 819427 | 20045.8 |
| tigr03915 family putative dna repair protein | SB49_RS03600 | Not Available | Negative | 819494 - 820267 | 29944.5 |
| xre family transcriptional regulator | SB49_RS03605 | Not Available | Positive | 820414 - 821181 | 28837.6 |
| hypothetical protein | SB49_RS16095 | Not Available | Negative | 821412 - 821576 | 6388.87 |
| hypothetical protein | SB49_RS03610 | Not Available | Negative | 821583 - 822293 | 26813.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
