Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS03520 | Not Available | Negative | 799055 - 799573 | 19928.0 |
| hypothetical protein | SB49_RS03525 | Not Available | Negative | 799717 - 800493 | 28408.4 |
| amidohydrolase | SB49_RS03530 | Not Available | Negative | 800559 - 801800 | 44589.8 |
| dsre family protein | SB49_RS03535 | Not Available | Negative | 801854 - 802399 | 19914.2 |
| atp-dependent helicase | SB49_RS03540 | Not Available | Positive | 802536 - 804860 | 88578.1 |
| l-threonylcarbamoyladenylate synthase | SB49_RS03545 | Not Available | Positive | 804878 - 805498 | 22795.6 |
| ompa family protein | SB49_RS03550 | Not Available | Negative | 805592 - 806443 | 31150.5 |
| glycosyltransferase family 2 protein | SB49_RS03555 | Not Available | Negative | 806540 - 807544 | 38895.8 |
| type i restriction enzyme hsdr n-terminal domain-containing protein | SB49_RS03560 | Not Available | Negative | 807646 - 808092 | 17707.4 |
| dna polymerase iii subunit delta | SB49_RS03565 | Not Available | Positive | 808119 - 809120 | 38057.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
