Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-oxoprolinase subunit pxpa | SB49_RS03420 | Not Available | Positive | 770864 - 771607 | 27645.2 |
| 5-oxoprolinase subunit pxpb | SB49_RS03425 | Not Available | Positive | 771604 - 772341 | 27942.8 |
| biotin-dependent carboxyltransferase family protein | SB49_RS03430 | Not Available | Positive | 772334 - 773173 | 31303.1 |
| aldehyde dehydrogenase | SB49_RS03435 | Not Available | Negative | 773284 - 774663 | 51351.0 |
| dihydroxy-acid dehydratase | SB49_RS03440 | Not Available | Positive | 775019 - 776695 | 58899.8 |
| biosynthetic-type acetolactate synthase large subunit | SB49_RS03445 | Not Available | Positive | 776831 - 778564 | 63235.6 |
| acetolactate synthase small subunit | SB49_RS03450 | Not Available | Positive | 778623 - 779156 | 20517.7 |
| ketol-acid reductoisomerase | SB49_RS03455 | Not Available | Positive | 779207 - 780682 | 53986.1 |
| threonine ammonia-lyase ilva | SB49_RS03460 | Not Available | Positive | 780798 - 782063 | 46453.9 |
| nadp-dependent glyceraldehyde-3-phosphate dehydrogenase | SB49_RS03465 | Not Available | Positive | 782229 - 783818 | 59015.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
