Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS00305 | Not Available | Negative | 58818 - 59390 | 21534.1 |
| ketosteroid isomerase family protein | SB49_RS00310 | Not Available | Negative | 59634 - 60089 | 17079.5 |
| hypothetical protein | SB49_RS00315 | Not Available | Negative | 60358 - 61404 | 40848.8 |
| hypothetical protein | SB49_RS00320 | Not Available | Negative | 61609 - 62205 | 23093.3 |
| site-specific tyrosine recombinase/integron integrase | SB49_RS00325 | Not Available | Negative | 62371 - 63489 | 42906.0 |
| hypothetical protein | SB49_RS00330 | Not Available | Positive | 63572 - 63973 | 15729.1 |
| rna polymerase sigma factor rpod/siga | SB49_RS00335 | Not Available | Negative | 64204 - 65067 | 32784.4 |
| polyribonucleotide nucleotidyltransferase | SB49_RS00340 | Not Available | Negative | 65255 - 67477 | 81539.5 |
| 30s ribosomal protein s15 | SB49_RS00345 | Not Available | Negative | 67706 - 67975 | 10583.0 |
| hypothetical protein | SB49_RS00350 | Not Available | Positive | 68231 - 69091 | 30881.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
