Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | SB49_RS03320 | Not Available | Negative | 744193 - 744837 | 23718.7 |
| na+/h+ antiporter nhac | SB49_RS03325 | Not Available | Negative | 745135 - 746628 | 52351.6 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | SB49_RS03330 | Not Available | Negative | 746698 - 747918 | 44261.3 |
| lrp/asnc family transcriptional regulator | SB49_RS03335 | Not Available | Positive | 748076 - 748534 | 17601.5 |
| dihydrolipoyl dehydrogenase | SB49_RS03340 | Not Available | Positive | 748627 - 750033 | 50741.5 |
| cdgsh iron-sulfur domain-containing protein | SB49_RS03345 | Not Available | Negative | 750088 - 750321 | 8514.95 |
| heparan-alpha-glucosaminide n-acetyltransferase domain-containing protein | SB49_RS03350 | Not Available | Negative | 750379 - 751575 | 45652.8 |
| nadph-dependent fmn reductase | SB49_RS03355 | Not Available | Positive | 751704 - 752237 | 19633.3 |
| anthranilate synthase component i family protein | SB49_RS03360 | Not Available | Positive | 752245 - 753543 | 49158.7 |
| alpha/beta hydrolase | SB49_RS03365 | Not Available | Positive | 753606 - 754427 | 30760.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
