Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent oxidoreductase | SB49_RS03270 | Not Available | Positive | 734932 - 735573 | 24452.5 |
| degt/dnrj/eryc1/strs aminotransferase family protein | SB49_RS03275 | Not Available | Positive | 735636 - 736829 | 44325.7 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | SB49_RS03280 | Not Available | Negative | 736853 - 737983 | 41530.2 |
| lptf/lptg family permease | SB49_RS03285 | Not Available | Negative | 737995 - 739488 | 55936.5 |
| outer membrane lipoprotein carrier protein lola | SB49_RS03290 | Not Available | Negative | 739493 - 740134 | 24528.2 |
| dna translocase ftsk | SB49_RS03295 | Not Available | Negative | 740142 - 742520 | 88123.2 |
| diacylglycerol kinase | SB49_RS03300 | Not Available | Negative | 742584 - 742949 | 13250.7 |
| thiol peroxidase | SB49_RS03305 | Not Available | Negative | 742942 - 743448 | 18148.6 |
| duf6952 family protein | SB49_RS03310 | Not Available | Negative | 743566 - 743823 | 9546.57 |
| co-chaperone ybbn | SB49_RS03315 | Not Available | Negative | 743804 - 744118 | 11846.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
