Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 3 n-terminal domain-containing protein | SB49_RS03220 | Not Available | Positive | 715653 - 717965 | 84663.1 |
| tolc family protein | SB49_RS03225 | Not Available | Negative | 718060 - 719463 | 51616.1 |
| efflux rnd transporter permease subunit | SB49_RS03230 | Not Available | Negative | 719468 - 722620 | 114033.0 |
| efflux rnd transporter periplasmic adaptor subunit | SB49_RS03235 | Not Available | Negative | 722642 - 723751 | 39975.7 |
| gbsr/marr family transcriptional regulator | SB49_RS03240 | Not Available | Negative | 723774 - 724268 | 19083.1 |
| mfs transporter | SB49_RS03245 | Not Available | Positive | 724491 - 725660 | 41735.1 |
| bama/tama family outer membrane protein | SB49_RS03250 | Not Available | Negative | 725920 - 728235 | 87331.6 |
| translocation/assembly module tamb domain-containing protein | SB49_RS03255 | Not Available | Negative | 728240 - 733171 | 182654.0 |
| duf808 domain-containing protein | SB49_RS03260 | Not Available | Positive | 733512 - 734414 | 32086.3 |
| Trna-ser | Not Available | Not Available | Positive | 734522 - 734609 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
