Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pa2169 family four-helix-bundle protein | SB49_RS03175 | Not Available | Negative | 703054 - 703530 | 18042.3 |
| hypothetical protein | SB49_RS03180 | Not Available | Negative | 703608 - 703922 | 11892.3 |
| hypothetical protein | SB49_RS03185 | Not Available | Negative | 703973 - 704344 | 14453.2 |
| hypothetical protein | SB49_RS16010 | Not Available | Positive | 704630 - 704803 | 6440.97 |
| nitroreductase family protein | SB49_RS03190 | Not Available | Negative | 704909 - 705514 | 23272.2 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | SB49_RS03195 | Not Available | Positive | 705887 - 709615 | 142260.0 |
| ai-2e family transporter | SB49_RS03200 | Not Available | Negative | 709708 - 710736 | 38288.4 |
| pas domain s-box protein | SB49_RS03205 | Not Available | Negative | 710802 - 713645 | 108545.0 |
| hypothetical protein | SB49_RS03210 | Not Available | Positive | 714233 - 714433 | 7759.11 |
| sugar phosphate isomerase/epimerase | SB49_RS03215 | Not Available | Positive | 714705 - 715571 | 32077.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
