Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | SB49_RS03085 | Not Available | Positive | 689072 - 689404 | 12391.8 |
| universal stress protein | SB49_RS03090 | Not Available | Positive | 689411 - 689923 | 19233.5 |
| hypothetical protein | SB49_RS03095 | Not Available | Negative | 689944 - 690213 | 10627.9 |
| rok family protein | SB49_RS03100 | Not Available | Positive | 690367 - 691329 | 33995.4 |
| universal stress protein | SB49_RS03105 | Not Available | Positive | 691437 - 692276 | 31864.9 |
| universal stress protein | SB49_RS03110 | Not Available | Positive | 692387 - 693235 | 32089.6 |
| universal stress protein | SB49_RS03115 | Not Available | Positive | 693240 - 694088 | 32134.4 |
| hypothetical protein | SB49_RS03120 | Not Available | Positive | 694262 - 694705 | 17529.5 |
| four-helix bundle copper-binding protein | SB49_RS16170 | Not Available | Positive | 695127 - 695291 | 6062.23 |
| gh3 auxin-responsive promoter family protein | SB49_RS03130 | Not Available | Positive | 695338 - 696867 | 58239.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
