Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-his | Not Available | Not Available | Positive | 651750 - 651825 | Not Available |
| m28 family peptidase | SB49_RS02890 | Not Available | Negative | 652007 - 653566 | 57984.2 |
| arac family transcriptional regulator | SB49_RS02895 | Not Available | Negative | 653636 - 654496 | 33432.6 |
| dihydrodipicolinate synthase family protein | SB49_RS02900 | Not Available | Positive | 654644 - 655579 | 34472.9 |
| aldehyde dehydrogenase (nadp(+)) | SB49_RS02905 | Not Available | Positive | 655611 - 657194 | 56850.1 |
| duf885 family protein | SB49_RS02910 | Not Available | Positive | 657202 - 658932 | 66320.8 |
| 4-hydroxyproline epimerase | SB49_RS02915 | Not Available | Positive | 658925 - 659932 | 37014.2 |
| dnaj c-terminal domain-containing protein | SB49_RS02920 | Not Available | Positive | 660091 - 660999 | 34199.6 |
| chaperone modulator cbpm | SB49_RS02925 | Not Available | Positive | 661013 - 661306 | 11697.0 |
| abc transporter atp-binding protein | SB49_RS02930 | Not Available | Negative | 661328 - 662005 | 25718.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
