Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pig-l family deacetylase | SB49_RS02835 | Not Available | Negative | 637905 - 640439 | 94470.1 |
| mechanosensitive ion channel family protein | SB49_RS02840 | Not Available | Negative | 640518 - 641060 | 20331.5 |
| hypothetical protein | SB49_RS02845 | Not Available | Negative | 641060 - 642007 | 35875.3 |
| maf-like protein | SB49_RS02850 | Not Available | Negative | 642042 - 642629 | 22246.8 |
| had family hydrolase | SB49_RS02855 | Not Available | Negative | 642636 - 643163 | 19563.6 |
| rossmann-like and duf2520 domain-containing protein | SB49_RS02860 | Not Available | Negative | 643156 - 643911 | 28275.2 |
| cytochrome c biogenesis protein ccsa | SB49_RS02865 | Not Available | Positive | 644050 - 647220 | 120252.0 |
| plp-dependent aspartate aminotransferase family protein | SB49_RS02870 | Not Available | Positive | 647305 - 648483 | 43062.5 |
| bacillithiol biosynthesis deacetylase bshb1 | SB49_RS02875 | Not Available | Positive | 648506 - 649228 | 26662.7 |
| hamp domain-containing sensor histidine kinase | SB49_RS02880 | Not Available | Negative | 649225 - 651315 | 79763.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
