Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cryptochrome/deoxyribodipyrimidine photo-lyase family protein | SB49_RS02785 | Not Available | Negative | 627298 - 628785 | 58212.4 |
| deoxyribodipyrimidine photo-lyase | SB49_RS02790 | Not Available | Negative | 628785 - 630095 | 51391.0 |
| sdr family nad(p)-dependent oxidoreductase | SB49_RS02795 | Not Available | Negative | 630111 - 630803 | 24930.1 |
| srpbcc family protein | SB49_RS02800 | Not Available | Negative | 630841 - 631338 | 19260.4 |
| hypothetical protein | SB49_RS02805 | Not Available | Positive | 631532 - 632659 | 42250.9 |
| duf2911 domain-containing protein | SB49_RS02810 | Not Available | Positive | 632753 - 633598 | 30697.7 |
| hypothetical protein | SB49_RS02815 | Not Available | Negative | 633636 - 633911 | 10691.7 |
| galactokinase | SB49_RS02820 | Not Available | Negative | 633923 - 635083 | 42859.5 |
| nrtr dna-binding winged helix domain-containing protein | SB49_RS02825 | Not Available | Negative | 635214 - 635918 | 27488.3 |
| sodium:solute symporter | SB49_RS02830 | Not Available | Negative | 636084 - 637799 | 63803.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
