Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 612539 - 612615 | Not Available |
| start-like domain-containing protein | SB49_RS02690 | Not Available | Positive | 612753 - 613136 | 14729.0 |
| aminotransferase class iv | SB49_RS02695 | Not Available | Positive | 613192 - 614037 | 32085.8 |
| yqge/algh family protein | SB49_RS02700 | Not Available | Negative | 614034 - 614594 | 21146.4 |
| hu family dna-binding protein | SB49_RS02705 | Not Available | Negative | 614691 - 614963 | 9376.3 |
| methionyl-trna formyltransferase | SB49_RS02710 | Not Available | Negative | 615141 - 616088 | 35319.7 |
| atp-dependent dna helicase recq | SB49_RS02715 | Not Available | Negative | 616090 - 617985 | 71692.5 |
| aaa family atpase | SB49_RS02720 | Not Available | Negative | 617988 - 618527 | 20629.7 |
| duf493 family protein | SB49_RS02725 | Not Available | Positive | 618615 - 618902 | 10937.2 |
| duf4290 domain-containing protein | SB49_RS02730 | Not Available | Positive | 618991 - 619641 | 25465.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
