Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosyl-l-methionine hydroxide adenosyltransferase family protein | SB49_RS02590 | Not Available | Negative | 585042 - 585872 | 30754.0 |
| phoh family protein | SB49_RS02595 | Not Available | Positive | 586000 - 586953 | 35865.8 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | SB49_RS02600 | Not Available | Positive | 586960 - 587910 | 36023.2 |
| polc-type dna polymerase iii | SB49_RS02605 | Not Available | Negative | 587967 - 588626 | 25523.0 |
| duf294 nucleotidyltransferase-like domain-containing protein | SB49_RS02610 | Not Available | Negative | 588623 - 590545 | 72087.5 |
| fasciclin domain-containing protein | SB49_RS02615 | Not Available | Positive | 590832 - 591419 | 19963.0 |
| ai-2e family transporter | SB49_RS02620 | Not Available | Negative | 591546 - 592601 | 39987.3 |
| duf1338 domain-containing protein | SB49_RS02625 | Not Available | Negative | 592996 - 593910 | 34721.9 |
| lysr family transcriptional regulator | SB49_RS02630 | Not Available | Positive | 593976 - 594863 | 33996.9 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | SB49_RS02635 | Not Available | Positive | 594925 - 597969 | 112882.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
