Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylamine--glycine ligase | SB49_RS02490 | Not Available | Positive | 559225 - 560544 | 50481.9 |
| gnat family n-acetyltransferase | SB49_RS02495 | Not Available | Positive | 560563 - 561021 | 18125.7 |
| alkylphosphonate utilization protein | SB49_RS02500 | Not Available | Negative | 561074 - 561652 | 21602.7 |
| hypothetical protein | SB49_RS02505 | Not Available | Positive | 561807 - 562211 | 16188.0 |
| m20/m25/m40 family metallo-hydrolase | SB49_RS02510 | Not Available | Positive | 562315 - 563610 | 47049.6 |
| invasin domain 3-containing protein | SB49_RS02515 | Not Available | Negative | 563728 - 569703 | 209141.0 |
| 3-keto-5-aminohexanoate cleavage protein | SB49_RS02520 | Not Available | Positive | 570185 - 571051 | 31751.8 |
| hypothetical protein | SB49_RS02525 | Not Available | Positive | 571066 - 571710 | 25757.2 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | SB49_RS02530 | Not Available | Negative | 571853 - 574051 | 80169.6 |
| (2fe-2s)-binding protein | SB49_RS02535 | Not Available | Negative | 574083 - 574547 | 16766.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
