Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | SB49_RS02440 | Not Available | Negative | 532354 - 533523 | 45521.0 |
| nad-dependent epimerase | SB49_RS02445 | Not Available | Negative | 533682 - 534710 | 38997.3 |
| nucleotide sugar dehydrogenase | SB49_RS02450 | Not Available | Negative | 534707 - 536104 | 52052.8 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | SB49_RS02455 | Not Available | Positive | 536372 - 537499 | 41674.9 |
| nucleoside-diphosphate sugar epimerase/dehydratase | SB49_RS02460 | Not Available | Positive | 537496 - 539430 | 72660.0 |
| polysaccharide biosynthesis/export family protein | SB49_RS02465 | Not Available | Positive | 539471 - 540241 | 28504.5 |
| gumc family protein | SB49_RS02470 | Not Available | Positive | 540278 - 542659 | 89041.0 |
| pkd domain-containing protein | SB49_RS02475 | Not Available | Positive | 543165 - 550649 | 261365.0 |
| pkd domain-containing protein | SB49_RS02480 | Not Available | Positive | 550908 - 558230 | 255705.0 |
| tyrosine-protein phosphatase | SB49_RS02485 | Not Available | Negative | 558250 - 558990 | 28806.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
