Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | SB49_RS02385 | Not Available | Negative | 519390 - 520040 | 23352.3 |
| sugar transferase | SB49_RS02390 | Not Available | Negative | 520121 - 520726 | 23347.9 |
| glycosyltransferase family 4 protein | SB49_RS02395 | Not Available | Negative | 520962 - 522143 | 44807.2 |
| glycosyltransferase family 4 protein | SB49_RS02400 | Not Available | Negative | 522200 - 523330 | 43787.6 |
| glycosyltransferase | SB49_RS02405 | Not Available | Negative | 523407 - 524504 | 42004.1 |
| lipopolysaccharide biosynthesis protein | SB49_RS02410 | Not Available | Negative | 524509 - 525957 | 54858.0 |
| o-antigen ligase | SB49_RS02415 | Not Available | Negative | 525986 - 527176 | 46168.6 |
| hypothetical protein | SB49_RS02420 | Not Available | Negative | 527356 - 529095 | 66124.0 |
| nucleotide sugar dehydrogenase | SB49_RS02430 | Not Available | Negative | 529931 - 531211 | 47012.7 |
| sdr family oxidoreductase | SB49_RS02435 | Not Available | Negative | 531290 - 532291 | 37130.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
