Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS02335 | Not Available | Positive | 507298 - 507660 | 13654.5 |
| porin family protein | SB49_RS02340 | Not Available | Positive | 507769 - 508842 | 40225.5 |
| ompa family protein | SB49_RS02345 | Not Available | Positive | 509277 - 510446 | 42880.6 |
| carbamoyltransferase n-terminal domain-containing protein | SB49_RS02350 | Not Available | Positive | 510529 - 512214 | 63657.6 |
| hypothetical protein | SB49_RS02355 | Not Available | Positive | 512555 - 513049 | 19067.8 |
| atp-grasp domain-containing protein | SB49_RS02360 | Not Available | Positive | 513134 - 514276 | 44093.9 |
| gnat family n-acetyltransferase | SB49_RS02365 | Not Available | Negative | 514362 - 515537 | 46412.1 |
| gnat family n-acetyltransferase | SB49_RS02370 | Not Available | Negative | 515630 - 516817 | 47375.3 |
| gnat family n-acetyltransferase | SB49_RS02375 | Not Available | Negative | 516939 - 518204 | 50011.3 |
| peptidoglycan bridge formation glycyltransferase fema/femb family protein | SB49_RS02380 | Not Available | Negative | 518211 - 519236 | 40310.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
