Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine kinase | SB49_RS02285 | Not Available | Positive | 493639 - 494490 | 32362.0 |
| rida family protein | SB49_RS02290 | Not Available | Negative | 494483 - 494863 | 13685.6 |
| putative lps assembly protein lptd | SB49_RS02295 | Not Available | Negative | 494898 - 497618 | 102659.0 |
| n-acetylmuramoyl-l-alanine amidase | SB49_RS02300 | Not Available | Positive | 497839 - 499167 | 49446.1 |
| mlad family protein | SB49_RS02305 | Not Available | Positive | 499224 - 500189 | 35186.1 |
| (fe-s)-binding protein | SB49_RS02310 | Not Available | Positive | 500193 - 501518 | 49966.4 |
| (fe-s)-binding protein | SB49_RS02315 | Not Available | Positive | 501536 - 502327 | 28898.9 |
| hypothetical protein | SB49_RS02320 | Not Available | Positive | 502338 - 502820 | 18581.9 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | SB49_RS02325 | Not Available | Positive | 502926 - 505865 | 109470.0 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | SB49_RS02330 | Not Available | Positive | 506064 - 507206 | 42679.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
