Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m15 family metallopeptidase | SB49_RS02235 | Not Available | Positive | 480819 - 481550 | 28363.9 |
| thump-like domain-containing protein | SB49_RS02240 | Not Available | Negative | 481543 - 482667 | 42872.3 |
| ai-2e family transporter | SB49_RS02245 | Not Available | Negative | 482741 - 483841 | 40471.5 |
| duf4159 domain-containing protein | SB49_RS02250 | Not Available | Negative | 483846 - 484496 | 24619.3 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | SB49_RS02255 | Not Available | Negative | 484801 - 485502 | 26649.4 |
| tfox/sxy family protein | SB49_RS02260 | Not Available | Negative | 485516 - 485854 | 13190.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | SB49_RS02265 | Not Available | Negative | 485865 - 486887 | 37296.0 |
| translocation/assembly module tamb domain-containing protein | SB49_RS02270 | Not Available | Positive | 486978 - 491402 | 165379.0 |
| 6-phosphofructokinase | SB49_RS02275 | Not Available | Positive | 491557 - 492543 | 35496.1 |
| type i glyceraldehyde-3-phosphate dehydrogenase | SB49_RS02280 | Not Available | Positive | 492562 - 493563 | 35726.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
