Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS02190 | Not Available | Positive | 469589 - 469882 | 10961.4 |
| proton-conducting transporter membrane subunit | SB49_RS02195 | Not Available | Positive | 469986 - 471470 | 55147.1 |
| duf2309 domain-containing protein | SB49_RS02200 | Not Available | Positive | 471470 - 473854 | 90086.7 |
| bile acid:sodium symporter family protein | SB49_RS02205 | Not Available | Negative | 474002 - 474976 | 35581.7 |
| dienelactone hydrolase family protein | SB49_RS02210 | Not Available | Positive | 475302 - 475988 | 25806.0 |
| gmc family oxidoreductase | SB49_RS02215 | Not Available | Positive | 476257 - 477975 | 64053.7 |
| gluconate 2-dehydrogenase subunit 3 family protein | SB49_RS02220 | Not Available | Positive | 477980 - 478696 | 26610.2 |
| hypothetical protein | SB49_RS02225 | Not Available | Positive | 478718 - 479311 | 22181.3 |
| hypothetical protein | SB49_RS16165 | Not Available | Positive | 479353 - 479553 | 6933.39 |
| glycoside hydrolase family 130 protein | SB49_RS02230 | Not Available | Negative | 479637 - 480740 | 41053.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
