Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | SB49_RS02130 | Not Available | Positive | 458754 - 461285 | 94582.1 |
| tetratricopeptide repeat protein | SB49_RS02135 | Not Available | Positive | 461321 - 462583 | 46470.0 |
| c40 family peptidase | SB49_RS02140 | Not Available | Negative | 462638 - 463390 | 28159.5 |
| acetyl-coa c-acyltransferase | SB49_RS02145 | Not Available | Negative | 463413 - 464588 | 40799.2 |
| hd family phosphohydrolase | SB49_RS02150 | Not Available | Positive | 464709 - 466754 | 78940.1 |
| Trna-ser | Not Available | Not Available | Positive | 466868 - 466951 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 467002 - 467076 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 467081 - 467154 | Not Available |
| hypothetical protein | SB49_RS02170 | Not Available | Positive | 467380 - 467859 | 17830.5 |
| hypothetical protein | SB49_RS02180 | Not Available | Positive | 468969 - 469277 | 11794.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
