Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar nucleotide-binding protein | SB49_RS02080 | Not Available | Negative | 444178 - 444999 | 31852.7 |
| glutaminase | SB49_RS02085 | Not Available | Negative | 445003 - 445917 | 33610.3 |
| glycine cleavage system aminomethyltransferase gcvt | SB49_RS02090 | Not Available | Negative | 445917 - 447002 | 39452.4 |
| aminopeptidase p family protein | SB49_RS02095 | Not Available | Positive | 447182 - 448792 | 60319.2 |
| threonine synthase | SB49_RS02100 | Not Available | Negative | 448816 - 450111 | 47900.4 |
| homoserine kinase | SB49_RS02105 | Not Available | Negative | 450144 - 451067 | 32578.4 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | SB49_RS02110 | Not Available | Negative | 451070 - 453514 | 88986.7 |
| nad(p)h-hydrate dehydratase | SB49_RS02115 | Not Available | Positive | 453785 - 455326 | 56619.9 |
| hypothetical protein | SB49_RS02120 | Not Available | Negative | 455335 - 455736 | 15779.4 |
| atp-dependent clp protease atp-binding subunit | SB49_RS02125 | Not Available | Negative | 455940 - 458492 | 95480.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
