Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubia-like protein eboc | SB49_RS01980 | Not Available | Positive | 426674 - 427531 | 31129.2 |
| 3-dehydroquinate synthase | SB49_RS01985 | Not Available | Positive | 427543 - 428685 | 42608.6 |
| metabolite traffic protein eboe | SB49_RS01990 | Not Available | Positive | 428704 - 429900 | 46326.3 |
| alkaline phosphatase family protein | SB49_RS01995 | Not Available | Positive | 429897 - 431273 | 52724.9 |
| transmembrane 220 family protein | SB49_RS02000 | Not Available | Positive | 431279 - 431635 | 13590.8 |
| dna polymerase iii subunit gamma/tau | SB49_RS02005 | Not Available | Negative | 431632 - 433446 | 68163.3 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 433579 - 433892 | Not Available |
| pyridoxal-phosphate dependent enzyme | SB49_RS02015 | Not Available | Negative | 433902 - 434846 | 34158.5 |
| rsmd family rna methyltransferase | SB49_RS02020 | Not Available | Negative | 434850 - 435392 | 20415.3 |
| duf3822 family protein | SB49_RS02025 | Not Available | Negative | 435392 - 436225 | 31767.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
