Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase catalytic subunit | SB49_RS01930 | Not Available | Positive | 417495 - 418421 | 34129.7 |
| hypothetical protein | SB49_RS01935 | Not Available | Positive | 418428 - 418769 | 13201.8 |
| ribonuclease z | SB49_RS01940 | Not Available | Positive | 418846 - 419754 | 34425.6 |
| pyridoxamine 5'-phosphate oxidase | SB49_RS01945 | Not Available | Positive | 419924 - 420571 | 24802.4 |
| histidine phosphatase family protein | SB49_RS01950 | Not Available | Positive | 420583 - 421071 | 18425.1 |
| polyphosphate kinase 1 | SB49_RS01955 | Not Available | Positive | 421068 - 423152 | 80386.2 |
| ppx/gppa phosphatase family protein | SB49_RS01960 | Not Available | Positive | 423161 - 424051 | 33238.4 |
| pp_00386 | SB49_RS01965 | Not Available | Negative | 424091 - 424672 | Not Available |
| eboa domain-containing protein | SB49_RS01970 | Not Available | Positive | 424875 - 425729 | 32888.6 |
| tatd family hydrolase | SB49_RS01975 | Not Available | Positive | 425731 - 426639 | 34055.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
