Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pspc domain-containing protein | SB49_RS15815 | Not Available | Negative | 29295 - 29831 | 19760.1 |
| hypothetical protein | SB49_RS00160 | Not Available | Negative | 29998 - 30426 | 16518.4 |
| p1 family peptidase | SB49_RS00165 | Not Available | Negative | 30654 - 31829 | 42570.9 |
| duf6090 family protein | SB49_RS00170 | Not Available | Negative | 32076 - 32789 | 27404.0 |
| duf6090 family protein | SB49_RS00175 | Not Available | Negative | 32822 - 33511 | 26716.5 |
| hypothetical protein | SB49_RS00180 | Not Available | Negative | 33655 - 34776 | 43839.4 |
| hypothetical protein | SB49_RS00185 | Not Available | Negative | 34854 - 35789 | 34849.9 |
| hypothetical protein | SB49_RS00190 | Not Available | Positive | 36233 - 37600 | 52418.4 |
| class i sam-dependent methyltransferase | SB49_RS00195 | Not Available | Negative | 37808 - 38632 | 30654.7 |
| prolyl oligopeptidase family serine peptidase | SB49_RS00200 | Not Available | Negative | 38812 - 40971 | 80423.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
